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TargetEnzymes

3',5'-cyclic-AMP phosphodiesterase 4D

Named enzymes, including the metabolising cytochromes and the monoamine oxidases.

Measurements
9
Compounds
9
Binding constants
0
Median pX
—

I · Identity

What this target is

Its function as UniProt states it, where in a cell the protein is found, and which cell types and tissues transcribe its gene.

Protein

PDE4D_HUMANPDE4DHomo sapiens

3',5'-cyclic-AMP phosphodiesterase 4D

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes

Quoted from UniProt’s FUNCTION annotation for Q08499 (reviewed).

What it acts with

STRING’s highest-confidence human functional partners. The combined score mixes several kinds of evidence, so each channel is shown separately — a partner supported by experiment is a different claim from one supported only by text mining, and for a receptor this is where its coupling appears as evidence rather than as assertion.

PartnerCombinedExperimentDatabaseText mining
PDE4DIP0.9840.2920.0000.979
PRKACA0.9680.6510.6500.750
AKAP60.9440.2920.0000.925
ARRB20.9330.6310.0000.827
DCK0.9320.0000.9000.349
ADK0.9230.0000.9000.269
PRKACB0.9190.1100.6500.750
PRKACG0.9180.1100.6500.750
ALDH7A10.9100.0000.0000.910
ENPP10.9100.0530.9000.131

Where it sits in the cell

  • Plasma membrane
  • Cytosol
  • Nucleoplasmadditional
  • Nuclear membraneadditional
  • Primary ciliumadditional

Human Protein Atlas, by antibody immunofluorescence in cell lines — a different assay from the expression figures below, which are RNA.

UniProt, curated Apical cell membrane · Cytoplasm · Membrane · Cytoplasm, cytoskeleton · Cytoplasm, cytoskeleton, microtubule organizing center, centrosome

Expression by cell type

Single cell type RNA, the 8 highest of those the Human Protein Atlas reports for this gene. Transcript, not protein, and a cell type rather than a tissue.

  • Renal connecting tubule cells10,730.8 nCPM
  • Myonuclei8,670.8 nCPM
  • Prostatic glandular cells7,016.6 nCPM
  • Neutrophil progenitors5,306.2 nCPM
  • Salivary acinar cells5,022.2 nCPM
  • Renal collecting duct intercalated cells4,569.2 nCPM
  • Renal collecting duct principal cells4,333.3 nCPM
  • Proximal tubule cells4,114.6 nCPM

Expression by tissue

The tissues this gene is enriched in, by consensus RNA. A tissue absent from this list is one the Atlas does not call specific for this gene, which is not the same as absent from it.

  • bone marrow70.7 nTPM
  • skeletal muscle63.5 nTPM

IV · Evidence

Every measurement at this target

Each row links to the ChEMBL assay it came from.

Functional readouts 9

IC₅₀, EC₅₀, AC₅₀ and potency. Assay-dependent, and not interchangeable with a binding constant.

TargetClassTypeValue (nM)pXOrganismAssay
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858
3',5'-cyclic-AMP phosphodiesterase 4DEnzymesAC50— no normalized value— value does not convert to pXHomo sapiensCHEMBL5291858