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TargetUnclassified

Single-strand selective monofunctional uracil DNA glycosylase

Matched no rule. Shown as-is rather than assigned a class by guesswork. Values below are reported as measured; because this is not a molecular target, they are not treated as affinities anywhere on this site.

Measurements
2
Compounds
2
Binding constants
0
Median pX
—

I · Identity

What this target is

Its function as UniProt states it, where in a cell the protein is found, and which cell types and tissues transcribe its gene.

Protein

SMUG1_HUMANSMUG1Homo sapiens

Single-strand selective monofunctional uracil DNA glycosylase

Recognizes base lesions in the genome and initiates base excision DNA repair. Acts as a monofunctional DNA glycosylase specific for uracil (U) residues in DNA with a preference for single-stranded DNA substrates. The activity is greater toward mismatches (U/G) compared to matches (U/A). Excises uracil (U), 5-formyluracil (fU) and uracil derivatives bearing an oxidized group at C5 [5-hydroxyuracil (hoU) and 5-hydroxymethyluracil (hmU)] in ssDNA and dsDNA, but not analogous cytosine derivatives (5-hydroxycytosine and 5-formylcytosine), nor other oxidized bases. The activity is damage-specific and salt-dependent. The substrate preference is the following: ssDNA > dsDNA (G pair) = dsDNA (A pair) at low salt concentration, and dsDNA (G pair) > dsDNA (A pair) > ssDNA at high salt concentration

Quoted from UniProt’s FUNCTION annotation for Q53HV7 (reviewed).

What it acts with

STRING’s highest-confidence human functional partners. The combined score mixes several kinds of evidence, so each channel is shown separately — a partner supported by experiment is a different claim from one supported only by text mining, and for a receptor this is where its coupling appears as evidence rather than as assertion.

PartnerCombinedExperimentDatabaseText mining
UNG0.9630.2260.0000.949
TDG0.9220.0000.0000.916
TYMS0.8820.0000.6730.553
MBD40.8620.0000.0000.860
APEX10.8520.0000.5000.715
ADAT30.8460.8420.0000.000
OGG10.8140.0000.0000.721
POLL0.8040.0000.0000.792
NEIL10.7920.0000.0000.791
UPRT0.7720.0760.6730.248

Where it sits in the cell

  • Nucleoplasm
  • Nucleoli fibrillar centeradditional
  • Cytosoladditional

Human Protein Atlas, by antibody immunofluorescence in cell lines — a different assay from the expression figures below, which are RNA.

UniProt, curated Nucleus

Expression by cell type

Single cell type RNA, the 6 highest of those the Human Protein Atlas reports for this gene. Transcript, not protein, and a cell type rather than a tissue.

  • Esophageal apical cells166.9 nCPM
  • Extravillous trophoblasts123.4 nCPM
  • Esophageal suprabasal cells118.2 nCPM
  • Syncytiotrophoblasts115.3 nCPM
  • Migrating cytotrophoblasts110.3 nCPM
  • Cytotrophoblasts106.7 nCPM

IV · Evidence

Every measurement at this target

Each row links to the ChEMBL assay it came from.

Other measurements 2

Everything else ChEMBL recorded for this compound — percentage inhibition, efficacy, half-life, cytotoxicity. Reported in the assay's own units, which is why no value is converted here.

TargetClassTypeValue (nM)pXOrganismAssay
Single-strand selective monofunctional uracil DNA glycosylaseUnclassifiedInhibition— no normalized value— value does not convert to pXHomo sapiensCHEMBL5665451
Single-strand selective monofunctional uracil DNA glycosylaseUnclassifiedInhibition— no normalized value— value does not convert to pXHomo sapiensCHEMBL5665451